Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7969

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7968: 16336 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 112971 to 114201 16336 mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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113,690 - 16336 mRNA_7968 0.58 0.7
113,792 - 16336 mRNA_7968 0.67 0.6
113,860 - 16336 mRNA_7968 0.72 -0.3
113,919 + 16336 mRNA_7968 0.77 0.2
113,979 + 16336 mRNA_7968 0.82 -1.3
113,981 - 16336 mRNA_7968 0.82 1.0
113,983 + 16336 mRNA_7968 0.82 1.3
113,983 - 16336 mRNA_7968 0.82 0.1
113,998 + 16336 mRNA_7968 0.83 -1.3
114,069 - 16336 mRNA_7968 0.89 -0.8
114,162 - 0.0
114,185 - 3.1
114,185 - -0.5
114,188 - -0.3
114,257 + -0.2
114,260 + -0.8
114,323 - -0.5
114,377 + -1.0
114,384 - -0.9
114,530 + 0.6
114,531 + -0.7
114,647 + -0.5
114,651 - -2.4
114,724 - 16337 mRNA_7969 0.11 0.0
114,731 + 16337 mRNA_7969 0.13 0.9
114,760 - 16337 mRNA_7969 0.18 0.3
114,840 - 16337 mRNA_7969 0.31 0.1
114,980 - 16337 mRNA_7969 0.55 -0.1
114,998 - 16337 mRNA_7969 0.58 -0.7
115,000 - 16337 mRNA_7969 0.58 -0.6
115,078 - 16337 mRNA_7969 0.72 -0.4
115,087 - 16337 mRNA_7969 0.73 0.6
115,087 + 16337 mRNA_7969 0.73 0.3
115,090 - 16337 mRNA_7969 0.74 2.3
115,093 - 16337 mRNA_7969 0.74 0.4
115,182 + 16337 mRNA_7969 0.89 0.5
115,234 + 0.4
115,284 - 0.5
115,306 + -1.1
115,309 - -0.5
115,534 + 0.9
115,698 + 16338 mRNA_7970 0.16 -0.8
115,717 - 16338 mRNA_7970 0.18 0.8
115,819 - 16338 mRNA_7970 0.27 1.2
115,839 + 16338 mRNA_7970 0.28 0.4
115,966 - 16338 mRNA_7970 0.39 -3.7
116,048 + 16338 mRNA_7970 0.47 -0.7
116,051 - 16338 mRNA_7970 0.47 0.6
116,114 + 16338 mRNA_7970 0.52 0.8
116,117 + 16338 mRNA_7970 0.53 -0.4
116,135 - 16338 mRNA_7970 0.54 1.3
116,170 + 16338 mRNA_7970 0.57 1.9
116,185 - 16338 mRNA_7970 0.58 -0.7