Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7957

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7956: 16324 - K03146 THI4, THI1 thiamine thiazole synthase, at 96703 to 99029 16324 mRNA_7957: 16325 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 99297 to 100218 16325 mRNA_7958: 16326 - Hypothetical Protein, at 100793 to 101343 16326

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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98,340 + 16324 mRNA_7956 0.70 -0.0
98,343 - 16324 mRNA_7956 0.70 -1.5
98,797 + 0.8
98,905 + 0.2
98,941 - -0.0
98,943 - 0.4
98,982 + 0.2
99,218 + 0.1
99,418 - 16325 mRNA_7957 0.13 1.5
99,423 + 16325 mRNA_7957 0.14 -1.3
99,500 + 16325 mRNA_7957 0.22 -1.4
99,652 - 16325 mRNA_7957 0.39 0.2
99,858 + 16325 mRNA_7957 0.61 -0.2
99,861 - 16325 mRNA_7957 0.61 -0.7
99,873 + 16325 mRNA_7957 0.62 1.3
100,150 + 0.2
100,305 - -0.2
100,466 + 0.3
100,539 + -1.2
100,541 - -0.2
100,589 + -0.3
100,759 - -0.2