Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7955

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93400 to 95869 16323 mRNA_7956: 16324 - K03146 THI4, THI1 thiamine thiazole synthase, at 96703 to 99029 16324

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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92,797 + -1.1
92,979 - 0.7
93,326 + -0.1
93,335 - 0.0
93,338 + -0.8
93,342 - 0.5
93,347 + 0.6
93,348 - -0.1
93,349 + 1.4
93,349 + 2.2
93,524 - -0.8
93,893 - 16323 mRNA_7955 0.20 1.6
93,956 - 16323 mRNA_7955 0.23 -0.1
94,283 - 16323 mRNA_7955 0.36 -0.6
94,373 - 16323 mRNA_7955 0.39 0.7
94,382 - 16323 mRNA_7955 0.40 0.1
94,430 - 16323 mRNA_7955 0.42 1.4
94,691 - 16323 mRNA_7955 0.52 0.1
95,123 - 16323 mRNA_7955 0.70 -1.0
95,165 - 16323 mRNA_7955 0.71 0.8
95,254 - 16323 mRNA_7955 0.75 -0.3
95,257 + 16323 mRNA_7955 0.75 -1.9
95,534 - 16323 mRNA_7955 0.86 0.4
95,573 + 16323 mRNA_7955 0.88 0.1
95,841 - -1.0
95,858 - -1.5
96,009 - 1.2
96,072 - 0.3
96,083 + -1.2
96,179 + 1.2
96,285 - -1.2
96,298 + -1.0
96,473 + 0.8
96,497 + -0.2
96,513 + -0.3
96,533 - 0.0
96,538 + 0.5
96,554 - 0.6
96,567 - 0.1
96,574 + 0.9
96,580 - 0.5
96,590 - -0.2
96,605 + 0.2
96,616 + 0.4
96,631 + -0.0
96,633 - 1.7
96,641 - 0.2