Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7938

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53529 to 55424 16305 mRNA_7938: 16306 - Hypothetical Protein, at 55876 to 58183 16306 mRNA_7939: 16307 - Hypothetical Protein, at 58388 to 59651 16307

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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55,106 + 16305 mRNA_7937 0.83 0.0
55,211 - 16305 mRNA_7937 0.89 0.6
55,524 - 1.1
55,594 - 0.2
55,602 - -1.1
55,616 + 3.4
55,740 + 0.2
55,744 - 1.1
55,792 - 0.6
56,076 + -0.8
56,081 - 0.4
56,229 - 16306 mRNA_7938 0.15 -0.4
56,534 + 16306 mRNA_7938 0.29 -0.5
56,822 - 16306 mRNA_7938 0.41 -0.6
56,829 - 16306 mRNA_7938 0.41 -1.6
57,261 - 16306 mRNA_7938 0.60 0.4
57,264 + 16306 mRNA_7938 0.60 -0.8
57,333 - 16306 mRNA_7938 0.63 -1.3
57,338 - 16306 mRNA_7938 0.63 -0.3
57,544 + 16306 mRNA_7938 0.72 1.0
57,555 + 16306 mRNA_7938 0.73 -0.1
57,579 - 16306 mRNA_7938 0.74 0.6
57,638 + 16306 mRNA_7938 0.76 0.0
57,641 - 16306 mRNA_7938 0.76 -0.1
57,944 + 16306 mRNA_7938 0.90 -0.1
58,102 - -0.3
58,157 - 0.8
58,288 - -0.2
58,302 + -0.2
58,321 - -0.1
58,341 + 0.5
58,503 + -1.3
58,576 + 16307 mRNA_7939 0.15 1.7