Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7937

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7936: 16304 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 52307 to 53072 16304 mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53529 to 55424 16305 mRNA_7938: 16306 - Hypothetical Protein, at 55876 to 58183 16306

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
52,686 - 16304 mRNA_7936 0.49 0.8
52,797 - 16304 mRNA_7936 0.64 0.2
52,826 + 16304 mRNA_7936 0.68 0.2
52,975 + 16304 mRNA_7936 0.87 -0.9
53,084 - -0.6
53,089 + -0.6
53,095 + -0.4
53,121 - 0.5
53,127 + 0.7
53,134 - 0.1
53,135 + 1.3
53,138 - 0.4
53,176 + -0.3
53,177 - 0.3
53,189 - -1.5
53,199 + -0.2
53,202 + 0.6
53,219 + -0.2
53,460 - 1.2
53,847 + 16305 mRNA_7937 0.17 -0.7
54,045 + 16305 mRNA_7937 0.27 0.9
54,142 - 16305 mRNA_7937 0.32 1.8
54,142 - 16305 mRNA_7937 0.32 -1.1
54,199 + 16305 mRNA_7937 0.35 1.1
54,202 - 16305 mRNA_7937 0.35 0.2
54,463 + 16305 mRNA_7937 0.49 0.6
54,629 + 16305 mRNA_7937 0.58 2.4
55,106 + 16305 mRNA_7937 0.83 0.0
55,211 - 16305 mRNA_7937 0.89 0.6
55,524 - 1.1
55,594 - 0.2
55,602 - -1.1
55,616 + 3.4
55,740 + 0.2
55,744 - 1.1
55,792 - 0.6
56,076 + -0.8
56,081 - 0.4
56,229 - 16306 mRNA_7938 0.15 -0.4