Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7918

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18272 to 19315 16286

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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17,331 + 16285 mRNA_7917 0.57 0.2
17,480 - 16285 mRNA_7917 0.65 -1.5
17,684 - 16285 mRNA_7917 0.77 1.7
17,789 - 16285 mRNA_7917 0.83 -1.1
17,900 + 16285 mRNA_7917 0.90 0.4
18,055 + 1.2
18,058 - -0.8
18,219 + 0.2
18,322 - 1.5
18,351 - 0.9
18,358 - 0.6
18,417 - 16286 mRNA_7918 0.14 -0.8
18,480 - 16286 mRNA_7918 0.20 1.0
18,788 - 16286 mRNA_7918 0.49 -1.6
18,791 - 16286 mRNA_7918 0.50 1.3
18,915 + 16286 mRNA_7918 0.62 1.0
18,916 - 16286 mRNA_7918 0.62 0.6
19,036 + 16286 mRNA_7918 0.73 -0.5
19,095 + 16286 mRNA_7918 0.79 0.3
19,100 - 16286 mRNA_7918 0.79 0.3
19,378 - -0.5
19,588 + 0.0
19,654 - -0.7
19,764 - 0.1
19,817 - 0.8
19,831 - -0.7
19,837 + 0.4
19,914 + 2.3
19,934 - -0.9
19,935 + -0.4
20,235 + -2.9
20,291 - 0.1