Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7916

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284 mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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13,950 - 16283 mRNA_7915 0.84 1.5
13,953 + 16283 mRNA_7915 0.84 -0.2
14,353 - -0.1
14,370 - -0.7
14,410 + 0.2
14,532 - 0.1
14,689 + 2.3
14,696 - 0.7
14,836 - 16284 mRNA_7916 0.12 -1.1
14,843 + 16284 mRNA_7916 0.12 -2.6
15,322 - 16284 mRNA_7916 0.49 -0.9
15,555 + 16284 mRNA_7916 0.67 -0.5
15,576 + 16284 mRNA_7916 0.69 0.1
15,823 - 16284 mRNA_7916 0.88 1.3
15,852 + 0.4
16,151 - -1.2
16,153 - 0.5
16,182 + 1.3
16,184 - 0.9
16,282 - 0.2
16,291 - 1.5
16,291 - 0.7
16,303 + 0.5
16,307 - 3.7
16,309 + -0.3
16,310 - 0.9
16,314 + 0.3
16,317 + 0.8
16,325 - -0.0
16,344 - -0.9
16,360 - 0.5
16,446 - -0.1
16,663 - 16285 mRNA_7917 0.18 0.1