Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7900

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1329365 to 1331583 16267 mRNA_7900: 16268 - Hypothetical Protein, at 1332070 to 1333846 16268

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,331,457 + -1.2
1,331,536 + -4.4
1,331,540 - -4.8
1,331,556 - -0.2
1,331,567 - 0.1
1,331,585 + -2.8
1,331,735 - -3.6
1,331,742 - -0.2
1,331,770 + 0.5
1,331,776 + 0.9
1,331,821 - 1.2
1,331,835 - 0.3
1,331,849 + -0.7
1,331,854 + 1.2
1,331,862 - -1.5
1,331,880 - 0.3
1,331,897 + 1.1
1,331,906 - 1.3
1,331,913 + -0.9
1,332,015 + 2.4
1,332,177 + -1.9
1,332,197 + -2.0
1,332,599 + 16268 mRNA_7900 0.30 0.5
1,332,607 + 16268 mRNA_7900 0.30 0.3
1,332,610 - 16268 mRNA_7900 0.30 0.2
1,333,284 - 16268 mRNA_7900 0.68 -1.8
1,333,417 - 16268 mRNA_7900 0.76 0.4
1,333,472 - 16268 mRNA_7900 0.79 -0.3
1,333,782 + 2.7
1,333,882 - -0.4
1,333,887 - 0.1
1,333,917 + -0.4
1,333,918 - 0.5
1,334,028 - 0.5
1,334,029 - -0.1
1,334,037 - 1.0
1,334,049 - 0.5
1,334,066 + -1.0
1,334,079 + -1.4
1,334,120 - -0.1
1,334,130 + 1.3
1,334,177 - -1.1
1,334,177 + 1.0
1,334,181 - 0.3
1,334,198 - -0.8
1,334,199 + -1.0
1,334,210 + 0.9
1,334,213 - -0.2
1,334,215 + -0.4
1,334,223 + 0.3
1,334,228 - -1.7
1,334,242 - -0.3
1,334,247 - -0.6
1,334,250 - 0.1
1,334,254 - 0.2
1,334,255 + -0.0
1,334,256 + 0.1
1,334,269 - 0.7
1,334,301 - 0.7
1,334,315 - 0.5
1,334,319 - -0.0
1,334,320 + 1.6
1,334,325 + 0.0
1,334,335 - -0.8
1,334,336 + -2.2
1,334,481 - -0.9
1,334,481 + -0.2
1,334,487 + 0.6
1,334,595 + 2.6
1,334,747 - 1.1