Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7838

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7837: 16205 - Hypothetical Protein, at 1178519 to 1178828 16205 mRNA_7838: 16206 - K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase, at 1179136 to 1180563 16206 mRNA_7839: 16207 - Hypothetical Protein, at 1180939 to 1182264 16207

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,178,275 + -0.0
1,178,276 - 0.8
1,178,431 - 0.7
1,178,460 - 1.0
1,178,754 - 16205 mRNA_7837 0.76 1.1
1,178,879 - 0.3
1,178,894 + 1.4
1,179,047 - -0.6
1,179,061 + -0.7
1,179,061 - 1.1
1,179,206 - -0.4
1,179,252 + -0.7
1,179,377 - 16206 mRNA_7838 0.17 0.2
1,179,503 + 16206 mRNA_7838 0.26 0.1
1,179,505 - 16206 mRNA_7838 0.26 -1.3
1,179,929 - 16206 mRNA_7838 0.56 -0.4
1,179,935 - 16206 mRNA_7838 0.56 0.7
1,180,059 - 16206 mRNA_7838 0.65 1.0
1,180,089 - 16206 mRNA_7838 0.67 -0.6
1,180,112 - 16206 mRNA_7838 0.68 -0.3
1,180,283 - 16206 mRNA_7838 0.80 0.1
1,180,330 - 16206 mRNA_7838 0.84 -0.6
1,180,357 - 16206 mRNA_7838 0.86 0.6
1,180,365 - 16206 mRNA_7838 0.86 -0.7
1,180,397 - 16206 mRNA_7838 0.88 0.7
1,180,402 - 16206 mRNA_7838 0.89 -0.4
1,180,412 + 16206 mRNA_7838 0.89 -1.0
1,180,417 - 16206 mRNA_7838 0.90 0.9
1,180,442 + 0.5
1,180,602 - -0.3
1,180,602 + 0.3
1,180,626 + -0.7
1,180,626 - 1.8
1,180,630 + 1.1
1,180,639 + -1.0
1,180,639 + 0.1
1,180,639 + -0.1
1,180,648 - -1.6
1,180,663 + 0.0
1,180,674 + 0.0
1,180,711 + 0.5
1,180,747 + 0.7
1,180,809 - 0.6
1,180,809 - 2.1
1,180,817 - 0.6
1,180,830 - 0.6
1,180,844 - 0.9
1,180,848 + 0.4
1,180,849 - 0.7
1,180,851 + 1.6
1,180,853 - -0.1
1,180,854 + 0.6
1,180,855 + -0.2
1,180,856 - -0.4
1,180,859 - -1.1
1,180,861 + 0.4
1,180,869 - -0.4
1,180,877 - -0.6
1,180,885 - 1.5
1,180,895 + 0.3
1,180,897 + 0.3
1,181,018 + -1.4
1,181,039 - 0.4
1,181,040 - 1.0
1,181,154 + 16207 mRNA_7839 0.16 0.0
1,181,182 - 16207 mRNA_7839 0.18 0.4
1,181,197 + 16207 mRNA_7839 0.19 0.1
1,181,311 - 16207 mRNA_7839 0.28 0.3
1,181,313 + 16207 mRNA_7839 0.28 0.0
1,181,319 + 16207 mRNA_7839 0.29 -0.3
1,181,325 - 16207 mRNA_7839 0.29 -0.7
1,181,343 + 16207 mRNA_7839 0.30 0.1
1,181,346 - 16207 mRNA_7839 0.31 0.2
1,181,351 - 16207 mRNA_7839 0.31 -0.7
1,181,353 + 16207 mRNA_7839 0.31 0.2
1,181,353 + 16207 mRNA_7839 0.31 0.0
1,181,354 + 16207 mRNA_7839 0.31 0.4
1,181,358 + 16207 mRNA_7839 0.32 0.4
1,181,378 + 16207 mRNA_7839 0.33 0.2
1,181,512 + 16207 mRNA_7839 0.43 0.3