Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7793

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7793: 16161 - KOG2533 Permease of the major facilitator superfamily, at 1079751 to 1082050 16161 mRNA_7794: 16162 - BLAST rRNA (adenine-N6,N6)-dimethyltransferase [Rhizoctonia..., at 1082300 to 1083358 16162

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,078,765 + 0.6
1,078,773 - 0.2
1,078,776 + 1.6
1,078,925 + -0.0
1,079,128 + -1.0
1,079,222 - 0.6
1,079,246 - -0.3
1,079,248 + 0.6
1,079,255 + 0.4
1,079,326 + -0.9
1,079,329 - -1.8
1,079,384 + -0.6
1,079,398 - -0.2
1,079,419 - 1.3
1,079,529 - 0.2
1,079,530 - 0.0
1,079,532 - -0.4
1,079,549 + 0.3
1,079,557 - 0.1
1,079,557 - -0.1
1,079,562 + -0.4
1,079,562 + -0.5
1,079,568 + 0.1
1,079,658 - 2.0
1,079,743 - 0.2
1,079,995 - 16161 mRNA_7793 0.11 -1.2
1,080,000 - 16161 mRNA_7793 0.11 1.0
1,080,145 - 16161 mRNA_7793 0.17 1.1
1,080,177 - 16161 mRNA_7793 0.19 -3.1
1,080,379 + 16161 mRNA_7793 0.27 -1.3
1,080,381 + 16161 mRNA_7793 0.27 0.8
1,080,752 - 16161 mRNA_7793 0.44 1.1
1,080,763 + 16161 mRNA_7793 0.44 1.5
1,080,896 - 16161 mRNA_7793 0.50 -0.5
1,080,953 - 16161 mRNA_7793 0.52 -2.2
1,081,174 - 16161 mRNA_7793 0.62 -1.7
1,081,175 + 16161 mRNA_7793 0.62 -0.6
1,081,346 + 16161 mRNA_7793 0.69 0.2
1,081,622 + 16161 mRNA_7793 0.81 -0.4
1,081,854 - -0.3
1,082,055 + 2.4
1,082,305 - 1.9
1,082,476 + 16162 mRNA_7794 0.17 0.5
1,082,732 - 16162 mRNA_7794 0.41 0.1
1,082,732 + 16162 mRNA_7794 0.41 0.5
1,082,894 + 16162 mRNA_7794 0.56 0.3
1,082,925 + 16162 mRNA_7794 0.59 0.6
1,082,930 - 16162 mRNA_7794 0.59 0.4
1,082,931 + 16162 mRNA_7794 0.60 -0.3
1,082,932 - 16162 mRNA_7794 0.60 -0.5
1,082,949 - 16162 mRNA_7794 0.61 -0.2
1,082,956 - 16162 mRNA_7794 0.62 0.7
1,082,957 + 16162 mRNA_7794 0.62 0.9
1,083,044 - 16162 mRNA_7794 0.70 0.0
1,083,045 - 16162 mRNA_7794 0.70 0.1