Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7788

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7787: 16155 - Hypothetical Protein, at 1067923 to 1069410 16155 mRNA_7788: 16156 - Hypothetical Protein, at 1069801 to 1071312 16156 mRNA_7789: 16157 - Hypothetical Protein, at 1071827 to 1073399 16157

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,069,094 - 16155 mRNA_7787 0.79 -0.1
1,069,145 - 16155 mRNA_7787 0.82 -1.1
1,069,434 + 1.2
1,069,568 + -1.3
1,069,611 + -0.4
1,069,698 - -1.1
1,069,712 - 0.0
1,069,856 - 0.0
1,069,872 + -2.6
1,069,874 - -0.7
1,069,874 - -0.7
1,069,876 - 0.5
1,069,962 + 16156 mRNA_7788 0.11 -1.5
1,070,013 + 16156 mRNA_7788 0.14 -0.5
1,070,195 + 16156 mRNA_7788 0.26 -1.1
1,070,195 + 16156 mRNA_7788 0.26 0.5
1,070,285 + 16156 mRNA_7788 0.32 0.7
1,070,285 + 16156 mRNA_7788 0.32 -2.2
1,070,318 + 16156 mRNA_7788 0.34 -0.2
1,070,429 - 16156 mRNA_7788 0.42 -0.0
1,070,584 - 16156 mRNA_7788 0.52 1.5
1,070,862 - 16156 mRNA_7788 0.70 0.1
1,070,989 - 16156 mRNA_7788 0.79 -0.1
1,071,053 + 16156 mRNA_7788 0.83 0.6
1,071,163 - -2.8
1,071,313 - 1.7
1,071,327 + 0.8
1,071,328 - -0.9
1,071,332 + -0.5
1,071,338 + 0.0
1,071,461 - 0.4
1,071,483 + 0.8
1,071,599 - 0.9
1,071,620 - 0.6
1,071,624 - -0.6
1,071,732 - 0.6
1,071,746 + 0.8
1,071,764 - 0.2
1,071,789 - 1.8
1,071,803 - -0.4
1,071,807 - 0.4
1,071,858 + 1.0
1,071,874 - 1.5
1,071,912 - -0.5
1,071,920 - -0.5
1,072,183 + 16157 mRNA_7789 0.23 0.2
1,072,259 - 16157 mRNA_7789 0.27 -1.4