Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7763

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7762: 16130 - K20302 TRAPPC3, BET3 trafficking protein particle complex subunit 3, at 1009645 to 1010524 16130 mRNA_7763: 16131 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 1010750 to 1013184 16131 mRNA_7764: 16132 - Hypothetical Protein, at 1014055 to 1015066 16132

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,009,912 - 16130 mRNA_7762 0.30 -2.3
1,010,669 - 0.5
1,010,669 - 0.4
1,010,700 - 0.7
1,010,820 - -0.7
1,010,834 - 1.3
1,010,996 + 16131 mRNA_7763 0.10 -0.3
1,011,002 + 16131 mRNA_7763 0.10 0.2
1,011,041 + 16131 mRNA_7763 0.12 1.8
1,011,041 + 16131 mRNA_7763 0.12 -0.0
1,011,260 - 16131 mRNA_7763 0.21 -0.7
1,011,267 + 16131 mRNA_7763 0.21 0.3
1,011,448 - 16131 mRNA_7763 0.29 0.7
1,011,549 + 16131 mRNA_7763 0.33 0.5
1,011,703 - 16131 mRNA_7763 0.39 -0.4
1,011,741 + 16131 mRNA_7763 0.41 -2.7
1,011,742 + 16131 mRNA_7763 0.41 -0.2
1,012,033 - 16131 mRNA_7763 0.53 0.8
1,012,178 - 16131 mRNA_7763 0.59 0.3
1,012,196 - 16131 mRNA_7763 0.59 1.1
1,012,318 - 16131 mRNA_7763 0.64 0.7
1,012,495 - 16131 mRNA_7763 0.72 0.4
1,012,864 + 16131 mRNA_7763 0.87 0.3
1,013,025 - 0.2
1,013,040 - -0.6
1,013,166 + -0.3
1,013,319 + 0.3
1,013,326 - 0.3
1,013,331 - 1.0
1,013,344 - -0.9
1,013,467 + 0.8
1,013,470 + -1.0
1,013,470 - 0.0
1,013,472 - -0.1
1,013,482 - 0.9
1,013,482 + -0.8
1,013,498 + -0.9
1,013,498 - 0.5
1,013,508 - 0.5
1,013,511 + -0.1
1,013,549 - -0.7
1,013,627 - 2.4
1,013,649 - -1.5
1,013,657 + -1.6
1,013,663 + 0.2
1,013,673 + -0.2
1,013,791 - -0.2
1,013,797 - 0.8
1,013,805 + 0.2
1,013,830 - 1.1
1,013,837 + 0.3
1,013,941 - -1.0
1,013,961 - -0.3
1,013,969 + 0.5
1,013,976 - -0.0