Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7759

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7758: 16126 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 999313 to 1000093 16126 mRNA_7759: 16127 - K11824 AP2A AP-2 complex subunit alpha, at 1000288 to 1003990 16127

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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999,534 + 16126 mRNA_7758 0.28 0.9
999,694 - 16126 mRNA_7758 0.49 1.0
999,700 - 16126 mRNA_7758 0.50 0.9
999,792 - 16126 mRNA_7758 0.61 1.6
999,828 - 16126 mRNA_7758 0.66 -0.7
999,838 - 16126 mRNA_7758 0.67 0.0
1,000,174 + -2.0
1,000,430 + 0.2
1,000,568 + 1.4
1,000,899 + 16127 mRNA_7759 0.17 0.1
1,001,586 + 16127 mRNA_7759 0.35 1.2
1,001,674 + 16127 mRNA_7759 0.37 0.2
1,001,889 - 16127 mRNA_7759 0.43 1.2
1,002,110 + 16127 mRNA_7759 0.49 -0.8
1,002,462 - 16127 mRNA_7759 0.59 0.4
1,002,897 - 16127 mRNA_7759 0.70 0.8
1,003,646 + -0.1
1,003,927 + 0.6
1,003,933 + 0.3
1,004,074 - 0.4
1,004,201 - 1.2
1,004,206 + 0.3
1,004,234 - 0.4
1,004,342 + 0.5