Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7723

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7722: 16090 - BLAST iQ calmodulin-binding motif protein [Moesziomyces..., at 928905 to 930722 16090 mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931116 to 931814 16091 mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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930,117 + 16090 mRNA_7722 0.67 -1.1
930,149 + 16090 mRNA_7722 0.68 0.2
930,294 + 16090 mRNA_7722 0.76 -0.3
930,581 - -0.4
930,582 + 0.9
930,680 - -0.5
930,733 - -0.7
930,754 - -0.1
930,758 - 0.1
931,028 - -0.3
931,032 + -0.2
931,144 - 0.2
931,282 + 16091 mRNA_7723 0.24 0.3
931,309 - 16091 mRNA_7723 0.28 0.2
931,314 + 16091 mRNA_7723 0.28 -0.5
931,640 - 16091 mRNA_7723 0.75 -0.6
931,754 + 0.3
931,763 + 0.5
931,773 + 0.2
931,810 + -0.7
931,905 - -0.9
931,944 - 1.4
932,104 + -1.5
932,107 - -0.2
932,228 + 16092 mRNA_7724 0.12 1.8
932,263 + 16092 mRNA_7724 0.15 0.8
932,339 + 16092 mRNA_7724 0.20 1.6
932,377 - 16092 mRNA_7724 0.23 0.0
932,500 + 16092 mRNA_7724 0.32 0.3
932,542 - 16092 mRNA_7724 0.35 1.5
932,542 + 16092 mRNA_7724 0.35 1.1
932,776 - 16092 mRNA_7724 0.51 -0.7