Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7697

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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861,541 + 16064 mRNA_7696 0.80 -0.7
861,592 - 16064 mRNA_7696 0.81 -1.6
862,328 - -1.1
862,369 + -4.4
862,372 - -0.5
862,393 - -0.3
862,603 + -0.1
862,674 - 16065 mRNA_7697 0.15 -0.6
862,835 - 16065 mRNA_7697 0.26 -1.1
862,855 + 16065 mRNA_7697 0.28 0.2
862,856 - 16065 mRNA_7697 0.28 -1.8
862,857 + 16065 mRNA_7697 0.28 -1.2
863,128 + 16065 mRNA_7697 0.47 0.8
863,235 - 16065 mRNA_7697 0.55 1.5
863,282 - 16065 mRNA_7697 0.58 -0.6
863,402 - 16065 mRNA_7697 0.66 -0.4
863,578 - 16065 mRNA_7697 0.79 -0.9
863,581 + 16065 mRNA_7697 0.79 -2.0
863,588 + 16065 mRNA_7697 0.80 -0.3
863,664 - 16065 mRNA_7697 0.85 -1.6
863,677 + 16065 mRNA_7697 0.86 0.2
863,709 - 16065 mRNA_7697 0.88 0.6
863,710 + 16065 mRNA_7697 0.88 -0.5
863,734 + 16065 mRNA_7697 0.90 0.3
863,974 + 1.7
863,980 + 0.4
863,984 + 1.4
863,996 - 0.3
864,000 + 0.9
864,004 - 1.5
864,017 + -0.3
864,020 - -0.1
864,027 - -1.9
864,033 + 0.2
864,034 - -0.0
864,036 + -0.4
864,060 - -0.5
864,061 + 0.2
864,062 + 0.9
864,076 - -1.6
864,076 - -0.2
864,083 - 0.1
864,086 - -0.2
864,089 + -0.4
864,089 + 0.2
864,118 - 1.0
864,118 - -0.7
864,118 + 1.4
864,235 + -0.0
864,245 + 2.3
864,318 - 0.5
864,361 - -0.3
864,371 - 1.0
864,382 - 2.5
864,794 - 16066 mRNA_7698 0.49 1.0