Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7692

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849187 to 849939 16059 mRNA_7692: 16060 - HMMPfam-Cell division control protein 14, SIN component-PF08045, at 850554 to 851989 16060 mRNA_7693: 16061 - SUPERFAMILY--SSF57701, at 852118 to 853465 16061

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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849,594 + 16059 mRNA_7691 0.54 -0.5
849,830 + 16059 mRNA_7691 0.85 -0.1
849,977 + 0.2
849,985 + 1.7
850,133 + -0.7
850,274 - -0.1
850,289 + 0.7
850,299 + -0.5
850,419 - 0.4
850,582 - -1.2
850,711 - 16060 mRNA_7692 0.11 0.8
850,732 + 16060 mRNA_7692 0.12 1.0
850,765 + 16060 mRNA_7692 0.15 0.8
851,009 + 16060 mRNA_7692 0.32 0.3
851,102 + 16060 mRNA_7692 0.38 0.1
851,138 - 16060 mRNA_7692 0.41 -3.1
851,147 - 16060 mRNA_7692 0.41 0.5
851,267 + 16060 mRNA_7692 0.50 -0.4
851,302 - 16060 mRNA_7692 0.52 -0.6
851,324 + 16060 mRNA_7692 0.54 -1.1
851,324 + 16060 mRNA_7692 0.54 -1.5
851,453 - 16060 mRNA_7692 0.63 2.0
851,585 - 16060 mRNA_7692 0.72 1.4
851,599 + 16060 mRNA_7692 0.73 -0.4
851,624 - 16060 mRNA_7692 0.75 1.3
851,628 - 16060 mRNA_7692 0.75 0.2
851,637 + 16060 mRNA_7692 0.75 0.3
851,878 + -0.1
851,878 + -0.9
851,878 + 0.1
852,031 + -0.2
852,048 - 0.5
852,076 + 0.5
852,284 + 16061 mRNA_7693 0.12 1.3
852,483 - 16061 mRNA_7693 0.27 -1.8
852,483 + 16061 mRNA_7693 0.27 0.7
852,550 + 16061 mRNA_7693 0.32 -1.4
852,551 + 16061 mRNA_7693 0.32 0.8
852,663 - 16061 mRNA_7693 0.40 -0.1
852,891 - 16061 mRNA_7693 0.57 0.1
852,947 - 16061 mRNA_7693 0.61 0.4