Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7663

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788706 to 790925 16030 mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791381 to 793587 16031

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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790,402 - 16030 mRNA_7662 0.76 -1.9
790,975 - 0.2
790,988 - 0.4
790,990 + 1.8
790,993 - -0.8
790,995 - -0.3
791,015 - 0.5
791,036 + -0.1
791,092 - -0.4
791,131 - 0.4
791,133 + -0.3
791,151 + -0.5
791,156 + 0.4
791,193 - 0.2
791,199 - 2.8
791,212 + 0.2
791,286 + 1.7
791,290 - 1.6
791,295 + -1.0
791,295 + -0.4
791,312 + 0.0
791,315 - -0.0
791,335 - -1.5
791,339 - -1.2
791,431 + 0.5
791,444 + -1.7
791,446 + -0.3
791,447 - -0.3
791,475 + -0.1
791,760 + 16031 mRNA_7663 0.17 -2.7
791,851 + 16031 mRNA_7663 0.21 -0.0
791,990 - 16031 mRNA_7663 0.28 0.1
792,109 + 16031 mRNA_7663 0.33 -1.7
792,184 + 16031 mRNA_7663 0.36 -0.7
792,554 + 16031 mRNA_7663 0.53 0.6
792,903 - 16031 mRNA_7663 0.69 1.2
793,070 + 16031 mRNA_7663 0.77 0.9
793,071 - 16031 mRNA_7663 0.77 -0.2
793,126 - 16031 mRNA_7663 0.79 0.1
793,222 + 16031 mRNA_7663 0.83 0.2
793,297 - 16031 mRNA_7663 0.87 -1.1
793,402 - -0.6
793,452 + 0.7
793,610 + 0.5
793,657 - -1.1
793,690 - 0.1
793,709 - -0.3
793,759 - -1.2
793,769 + -0.8
793,774 - 0.9
793,787 - 1.4
793,795 - 0.6
793,832 + -0.6
793,917 + 1.0
793,919 - -0.7
793,929 + 1.1
793,930 - -0.2
793,936 + 0.3
793,936 - 0.7
793,939 + 0.6
793,940 + 1.1
793,941 + 1.2
793,941 + -0.6
793,948 - 1.1
793,955 - -0.9
793,957 - -0.3
793,960 + 0.1
793,963 - -1.5
793,968 - -0.2
793,977 - -0.4
793,994 + 0.6
794,005 + 0.7
794,006 - 2.0
794,008 - -1.0
794,009 + -1.4
794,034 + -0.3
794,035 + -2.2
794,037 + 2.4
794,053 + 0.4
794,058 + -0.7
794,071 - -0.8
794,074 + 0.5
794,077 - 0.8
794,078 + -0.8
794,081 + 0.1
794,082 + 0.2
794,093 - 1.1
794,096 - 1.2
794,098 - 0.1
794,104 + 0.2
794,105 - 0.2
794,115 + 0.1
794,117 + -1.0
794,122 - -0.3
794,122 - 0.4
794,123 - -0.8
794,127 - 1.0
794,130 + 1.2
794,134 + -0.0
794,135 - -0.5
794,136 - 1.0
794,138 + -0.1
794,141 + 1.4
794,152 - -0.5
794,155 + -1.8
794,161 + -0.3
794,162 - -0.6
794,164 - 0.9
794,164 - -1.3
794,165 - 0.6
794,167 - 0.4
794,168 + 1.0
794,174 + -1.9
794,175 + -0.5
794,177 - -0.1
794,177 + -0.8
794,179 - 0.0
794,180 - 0.2
794,180 - 0.1
794,182 + -0.1
794,184 + 0.4
794,185 + -0.1
794,185 - 2.1
794,186 + 0.5
794,187 - 1.6
794,187 - 1.3
794,202 - 0.1
794,203 + -1.4
794,203 + 0.2
794,203 - 0.9
794,204 + 1.3
794,206 + -1.1
794,209 + 0.2
794,210 - -0.1
794,223 - 0.8
794,227 - 0.0
794,227 + 0.2
794,229 + -0.2
794,230 - -0.2
794,233 + 0.5
794,233 - -1.1
794,236 - -1.4
794,237 + 0.3
794,238 + 1.3
794,240 - -0.0
794,245 - -1.1
794,245 - -1.1
794,248 + -0.4
794,248 - 1.3
794,252 - -1.1
794,253 - 0.6
794,259 - -0.9
794,259 + -0.2
794,261 + 0.6
794,262 + -2.0
794,265 + 1.1
794,267 - 1.2
794,278 - 0.9
794,281 - 1.7
794,283 + -1.3
794,292 + 0.4
794,372 + -2.5
794,396 + 0.0
794,418 + -0.8
794,422 + -0.7
794,427 + -0.4
794,447 + -0.0
794,453 - 2.5
794,459 + 0.0
794,496 - -0.5
794,517 - 1.0
794,521 - -0.2
794,525 + 1.0
794,529 + -0.3
794,542 - 0.2
794,555 + 0.6
794,556 + 0.8
794,558 + 0.6
794,561 - 0.1
794,563 + -0.2
794,568 + 0.8
794,575 + -0.0
794,576 - 0.1
794,578 - 0.8