Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7659

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7658: 16026 - KOG1398 Uncharacterized conserved protein, at 783062 to 785466 16026 mRNA_7659: 16027 - BLAST acetylornithine transaminase [Moesziomyces antarc..., at 785561 to 786043 16027 mRNA_7660: 16028 - Interpro RNA polymerase II transcription mediator complex subunit 9 0, at 786573 to 787086 16028

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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784,648 - 16026 mRNA_7658 0.66 0.2
784,902 - 16026 mRNA_7658 0.77 0.2
785,080 + 16026 mRNA_7658 0.84 -0.6
785,080 + 16026 mRNA_7658 0.84 -0.3
785,096 - 16026 mRNA_7658 0.85 0.5
785,189 - 16026 mRNA_7658 0.88 1.6
785,223 - 16026 mRNA_7658 0.90 1.7
785,369 + -1.0
785,371 + 0.0
785,376 + 0.9
785,380 - -0.3
785,382 - 0.5
785,525 + -0.3
785,540 - -0.8
785,542 + -0.4
785,562 + -2.7
785,692 - 16027 mRNA_7659 0.27 -3.3
785,842 - 16027 mRNA_7659 0.58 -4.0
785,968 - 16027 mRNA_7659 0.84 1.6
786,118 - 0.3
786,245 - 0.2
786,265 + -3.1
786,292 + -0.4
786,337 - 0.1