Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7593

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7592: 15960 - Hypothetical Protein, at 636503 to 637419 15960 mRNA_7593: 15961 - K15631 ABA3 molybdenum cofactor sulfurtransferase, at 637612 to 640700 15961 mRNA_7594: 15962 - K00106 XDH xanthine dehydrogenase/oxidase, at 640991 to 646168 15962

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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636,766 + 15960 mRNA_7592 0.29 2.5
637,336 - 0.4
637,527 - 0.7
637,588 - -1.1
637,787 - -0.3
638,183 - 15961 mRNA_7593 0.18 0.7
638,205 + 15961 mRNA_7593 0.19 0.8
638,499 - 15961 mRNA_7593 0.29 0.2
638,884 - 15961 mRNA_7593 0.41 0.6
639,433 - 15961 mRNA_7593 0.59 -0.3
639,737 - 15961 mRNA_7593 0.69 1.3
639,785 + 15961 mRNA_7593 0.70 1.2
639,879 - 15961 mRNA_7593 0.73 0.6
639,926 + 15961 mRNA_7593 0.75 0.0
640,053 - 15961 mRNA_7593 0.79 -1.3
640,080 + 15961 mRNA_7593 0.80 -0.4
640,260 - 15961 mRNA_7593 0.86 0.2
640,341 - 15961 mRNA_7593 0.88 -0.1
640,341 - 15961 mRNA_7593 0.88 -0.9
640,346 - 15961 mRNA_7593 0.89 0.2
640,372 + 15961 mRNA_7593 0.89 0.9
640,643 - -1.0
640,813 - 0.5
640,820 + -0.5
640,828 - 3.0
640,836 - -0.0
640,836 + 0.3
640,958 - 0.7
640,968 + 0.3
640,969 + -0.8
640,972 - -1.5
640,976 - 0.4
640,977 + -0.1
640,980 - -0.4
641,081 - 0.5
641,252 - 0.0
641,279 - -0.2
641,362 - 0.1
641,419 + 0.7
641,524 + 15962 mRNA_7594 0.10 0.3
641,548 - 15962 mRNA_7594 0.11 0.7
641,681 - 15962 mRNA_7594 0.13 -1.9