Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7584

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544 15951 mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617839 to 618826 15952 mRNA_7585: 15953 - K03650 mnmE, trmE, MSS1 tRNA modification GTPase, at 619020 to 621044 15953

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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617,080 + 15951 mRNA_7583 0.65 0.4
617,214 + 15951 mRNA_7583 0.75 3.3
617,251 - 15951 mRNA_7583 0.78 -0.3
617,349 + 15951 mRNA_7583 0.85 -0.7
617,364 - 15951 mRNA_7583 0.87 0.6
617,484 + 0.5
617,622 + 0.6
617,633 - -0.2
617,686 + -1.3
617,794 + 0.9
617,833 + 1.2
618,089 - 15952 mRNA_7584 0.25 1.0
618,239 - 15952 mRNA_7584 0.40 -0.5
618,689 - 15952 mRNA_7584 0.86 0.5
618,698 + 15952 mRNA_7584 0.87 -0.3
618,814 + -0.6
618,825 + 1.9
618,843 - -0.5
618,960 - 0.4
618,969 - 0.7
618,971 - 1.0
618,974 + -1.1
619,683 - 15953 mRNA_7585 0.33 0.9
619,717 - 15953 mRNA_7585 0.34 1.6
619,718 - 15953 mRNA_7585 0.34 -2.0