Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7534

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7533: 15901 - K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2, at 507910 to 511338 15901 mRNA_7534: 15902 - K07304 msrA peptide-methionine (S)-S-oxide reductase, at 511662 to 512740 15902 mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512882 to 513517 15903

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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510,822 - 15901 mRNA_7533 0.85 1.0
510,977 - 15901 mRNA_7533 0.89 1.2
511,246 - 1.5
511,260 - 0.5
511,396 + 0.2
511,415 + -1.7
511,425 + -0.9
511,550 - 0.1
511,566 + 1.4
511,708 + 0.1
511,845 - 15902 mRNA_7534 0.17 -3.3
511,849 + 15902 mRNA_7534 0.17 -1.0
511,850 - 15902 mRNA_7534 0.17 1.2
512,001 + 15902 mRNA_7534 0.31 -0.2
512,013 - 15902 mRNA_7534 0.33 -1.2
512,013 + 15902 mRNA_7534 0.33 0.3
512,128 - 15902 mRNA_7534 0.43 0.9
512,255 + 15902 mRNA_7534 0.55 1.0
512,295 - 15902 mRNA_7534 0.59 -0.0
512,433 + 15902 mRNA_7534 0.71 -0.1
512,697 - 0.3
512,720 - -0.8
512,721 + 0.4
512,735 + -0.4
512,738 - -2.0
512,739 + 0.6
513,583 - 0.1
513,597 + -0.9
513,599 - -0.1
513,728 + -1.6