Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7473

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365102 to 366661 15840 mRNA_7473: 15841 - Hypothetical Protein, at 367495 to 368778 15841 mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369055 to 372143 15842

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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366,988 + -0.3
367,076 + -0.0
367,159 - -1.3
367,162 - 0.3
367,166 - 2.3
367,174 - 0.0
367,301 + 1.6
367,330 - -1.1
367,360 + -0.4
367,477 + 0.1
367,614 - 1.0
367,627 - 15841 mRNA_7473 0.10 1.7
367,636 - 15841 mRNA_7473 0.11 0.1
367,910 - 15841 mRNA_7473 0.32 2.2
367,916 + 15841 mRNA_7473 0.33 0.7
368,043 + 15841 mRNA_7473 0.43 0.3
368,180 + 15841 mRNA_7473 0.53 0.7
368,360 + 15841 mRNA_7473 0.67 0.6
368,481 + 15841 mRNA_7473 0.77 0.1
368,497 + 15841 mRNA_7473 0.78 2.2
368,498 + 15841 mRNA_7473 0.78 1.5
368,513 - 15841 mRNA_7473 0.79 0.8
368,626 + 15841 mRNA_7473 0.88 2.2
368,626 + 15841 mRNA_7473 0.88 0.6
368,644 + 15841 mRNA_7473 0.89 0.8
368,749 - -1.4
368,758 + -0.3
368,765 + -0.3
368,769 - 0.4
368,774 + 0.7
368,776 + 1.1
368,778 - 0.5
368,780 - -0.8
368,786 - -0.9
368,800 - 0.3
368,801 + -0.0
368,805 + -0.3
368,806 + -1.0
368,825 + 2.9
368,912 - 0.7
368,938 + 0.7
368,942 - 0.2
368,944 - 0.2
368,944 - 0.9
368,947 + 1.3
368,947 - 0.4
368,947 + 1.2
368,953 + 0.2
368,956 - -0.6
368,956 - 0.5
368,958 - 1.1
368,963 + 1.2
368,965 - 0.7
368,965 - 0.8
368,967 - -0.1
368,971 - 0.4
368,975 - -1.0
368,977 + -2.3
368,980 - -0.2
368,981 - 0.6
368,982 - 0.7
368,983 + 0.6
368,985 - -0.8
368,986 - 1.1
368,986 - 1.0
368,997 + -1.0
369,002 - -3.4
369,006 - -1.4
369,011 - 0.8
369,035 + -0.3
369,068 - 0.6
369,071 - 0.4
369,074 + -0.2
369,077 - 0.3
369,078 - 0.5
369,079 - 0.0
369,081 - -4.4
369,085 + 0.2
369,094 + -0.9
369,100 + 1.9
369,102 - 0.1
369,102 - -0.5
369,104 + -2.0
369,107 + 2.2
369,108 - -0.2
369,111 + -1.1
369,111 + 1.0
369,111 + 0.4
369,116 - 0.1
369,117 - 1.5
369,127 - 1.4
369,129 - 0.2
369,132 - -0.8
369,139 + 0.2
369,139 + 0.2
369,152 - 1.5
369,217 + -0.6
369,237 + -0.5
369,241 - 1.3
369,262 - -0.4
369,263 + -0.3
369,263 + 1.7
369,269 + 0.2
369,344 + -0.7
369,402 + 15842 mRNA_7474 0.11 -0.2
369,412 + 15842 mRNA_7474 0.12 1.9
369,433 - 15842 mRNA_7474 0.12 -0.1
369,448 - 15842 mRNA_7474 0.13 0.0
369,472 - 15842 mRNA_7474 0.13 2.8
369,507 + 15842 mRNA_7474 0.15 0.9
369,564 - 15842 mRNA_7474 0.16 0.8
369,577 + 15842 mRNA_7474 0.17 2.0
369,586 + 15842 mRNA_7474 0.17 1.8
369,601 - 15842 mRNA_7474 0.18 0.7
369,728 + 15842 mRNA_7474 0.22 0.8
369,731 + 15842 mRNA_7474 0.22 1.9