Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7445

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7444: 15812 - Hypothetical Protein, at 292305 to 293773 15812 mRNA_7445: 15813 - Hypothetical Protein, at 294010 to 294708 15813 mRNA_7446: 15814 - K14085 ALDH7A1 aldehyde dehydrogenase family 7 member A1, at 295299 to 297030 15814

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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293,119 + 15812 mRNA_7444 0.55 0.4
293,293 + 15812 mRNA_7444 0.67 0.4
293,848 - -0.3
294,275 - 15813 mRNA_7445 0.38 -1.5
294,426 - 15813 mRNA_7445 0.60 -1.0
294,556 - 15813 mRNA_7445 0.78 -0.1
294,578 + 15813 mRNA_7445 0.81 -0.3
294,603 - 15813 mRNA_7445 0.85 -1.7
294,606 - 15813 mRNA_7445 0.85 -0.1
294,632 + 15813 mRNA_7445 0.89 -1.2
294,726 - -0.3
294,743 + -2.3
294,745 + 0.6
294,885 - 2.6
294,886 - -1.2
294,890 - -0.6
294,891 - -1.6
294,892 - -0.1
294,892 + -2.6
294,892 - -1.2
294,893 + 1.3
294,898 - -0.7
294,900 + 0.0
294,901 - 0.2
294,902 - 0.2
294,905 + 0.3
294,906 - -0.2
294,916 - -0.5
294,922 + 0.4
294,927 - 0.4
294,928 - 0.8
294,933 + -1.5
294,935 + 0.1
294,955 + 0.3
294,959 + 0.5
294,969 + -1.0
294,969 - -0.4
294,983 + -0.1
294,985 - -0.2
295,189 - -0.5
295,238 - 0.8
295,257 + 1.3
295,260 + 0.4
295,266 + -0.0
295,275 + -0.1
295,371 + -0.4
295,399 - 0.5
295,414 + -0.1
295,422 - 0.3
295,693 + 15814 mRNA_7446 0.23 -2.4