Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7341

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7340: 15708 - K08073 PNKP bifunctional polynucleotide phosphatase/kinase, at 39779 to 41768 15708 mRNA_7341: 15709 - KOG4062 6-O-methylguanine-DNA methyltransferase MGMT/MGT1, involved in DNA repair, at 41862 to 42699 15709 mRNA_7342: 15710 - Hypothetical Protein, at 43163 to 45525 15710

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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41,042 - 15708 mRNA_7340 0.63 2.1
41,059 - 15708 mRNA_7340 0.64 -0.3
41,340 - 15708 mRNA_7340 0.78 1.6
41,525 + 15708 mRNA_7340 0.88 -0.3
41,738 + 0.4
41,803 + 1.3
41,934 - 0.2
41,960 + 15709 mRNA_7341 0.12 0.1
42,104 + 15709 mRNA_7341 0.29 0.1
42,238 - 15709 mRNA_7341 0.45 0.8
42,344 + 15709 mRNA_7341 0.58 1.2
42,392 - 15709 mRNA_7341 0.63 1.0
42,697 - -0.1
42,701 + -0.1
42,823 - 0.6
42,973 + -0.5
43,061 + -0.9
43,078 - -0.1
43,399 + -1.4