Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7334

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7333: 15701 - SUPERFAMILY--SSF52047, at 28402 to 29421 15701 mRNA_7334: 15702 - HMMPfam-RTA1 like protein-PF04479, at 29500 to 31086 15702 mRNA_7335: 15703 - Hypothetical Protein, at 31308 to 31781 15703 mRNA_7336: 15704 - Hypothetical Protein, at 31786 to 32791 15704

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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28,715 - 15701 mRNA_7333 0.31 -0.4
28,900 + 15701 mRNA_7333 0.49 -1.3
28,901 - 15701 mRNA_7333 0.49 0.4
29,051 + 15701 mRNA_7333 0.64 1.3
29,314 - 15701 mRNA_7333 0.89 0.8
29,371 - -0.2
29,516 - -0.3
29,620 - -0.3
29,620 + -0.6
29,664 - 15702 mRNA_7334 0.10 0.5
29,702 - 15702 mRNA_7334 0.13 0.5
29,913 - 15702 mRNA_7334 0.26 -0.4
29,970 + 15702 mRNA_7334 0.30 -0.3
30,341 - 15702 mRNA_7334 0.53 0.4
30,512 - 15702 mRNA_7334 0.64 0.3
30,819 + 15702 mRNA_7334 0.83 -0.4
30,820 - 15702 mRNA_7334 0.83 0.3
30,846 + 15702 mRNA_7334 0.85 -0.2
30,902 - 15702 mRNA_7334 0.88 -0.1
30,920 - 15702 mRNA_7334 0.89 0.1
30,947 - 0.8
31,065 - -0.6
31,237 + 0.3
31,239 + -0.9
31,259 + -0.0
31,263 + -0.2
31,271 + 0.1
31,285 - 0.6
31,291 - -0.3
31,293 - 0.9
31,299 - 1.8
31,301 - -0.7
31,303 - -1.3
31,315 - -0.1
31,326 - -0.4
31,330 - 0.7
31,340 + -0.0
31,341 - 0.4
31,342 - 0.1
31,372 - 15703 mRNA_7335 0.14 0.4
31,383 + 15703 mRNA_7335 0.16 0.4
31,385 - 15703 mRNA_7335 0.16 0.1
31,389 - 15703 mRNA_7335 0.17 0.5
31,397 + 15703 mRNA_7335 0.19 0.4
31,410 + 15703 mRNA_7335 0.22 1.9
31,434 + 15703 mRNA_7335 0.27 -0.0
31,458 + 15703 mRNA_7335 0.32 0.9
31,532 - 15703 mRNA_7335 0.47 -0.1