Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7292

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7291: 15659 - K16803 CKAP5, XMAP215 cytoskeleton-associated protein 5, at 1309556 to 1318572 15659 mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1318921 to 1320950 15660 mRNA_7293: 15661 - Hypothetical Protein, at 1321183 to 1322494 15661

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,318,197 - -0.2
1,318,204 - -0.6
1,318,323 + -0.2
1,318,355 + 1.3
1,318,631 - -0.9
1,318,640 - -0.8
1,318,785 - -0.5
1,318,794 + 0.9
1,318,803 - 0.9
1,318,942 + 1.0
1,319,053 + 0.3
1,319,080 - -0.6
1,319,106 - 0.1
1,319,321 - 15660 mRNA_7292 0.20 -0.4
1,319,365 + 15660 mRNA_7292 0.22 -0.5
1,319,514 + 15660 mRNA_7292 0.29 -0.0
1,319,941 - 15660 mRNA_7292 0.50 0.3
1,320,241 - 15660 mRNA_7292 0.65 1.7
1,320,328 + 15660 mRNA_7292 0.69 1.3
1,320,416 + 15660 mRNA_7292 0.74 1.0
1,320,438 - 15660 mRNA_7292 0.75 0.1
1,320,603 - 15660 mRNA_7292 0.83 -0.4
1,320,768 + -1.0
1,320,862 - 0.7
1,320,962 + 0.7
1,321,232 - 1.2
1,321,244 + 1.4
1,321,255 + 0.0
1,321,304 + -0.2
1,321,484 + 15661 mRNA_7293 0.23 -0.9
1,321,487 - 15661 mRNA_7293 0.23 0.6
1,321,528 - 15661 mRNA_7293 0.26 -0.2
1,321,531 + 15661 mRNA_7293 0.27 0.1
1,321,544 - 15661 mRNA_7293 0.28 0.8
1,321,565 + 15661 mRNA_7293 0.29 -1.1
1,321,652 - 15661 mRNA_7293 0.36 -0.5
1,321,783 - 15661 mRNA_7293 0.46 -1.1
1,321,823 - 15661 mRNA_7293 0.49 0.9
1,321,830 - 15661 mRNA_7293 0.49 0.4