Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7264

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7263: 15631 - K00615 E2.2.1.1, tktA, tktB transketolase, at 1251489 to 1254335 15631 mRNA_7264: 15632 - Hypothetical Protein, at 1254558 to 1258564 15632 mRNA_7265: 15633 - Hypothetical Protein, at 1259174 to 1259392 15633

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,254,469 + -1.3
1,254,487 - 0.6
1,254,609 + 0.2
1,254,633 - 0.5
1,254,640 + -0.8
1,254,695 - 1.3
1,254,784 + -1.1
1,254,951 - 0.0
1,254,957 + 0.6
1,255,007 + 15632 mRNA_7264 0.11 0.7
1,255,030 + 15632 mRNA_7264 0.12 0.2
1,255,103 + 15632 mRNA_7264 0.14 0.3
1,255,139 - 15632 mRNA_7264 0.14 -0.8
1,255,524 - 15632 mRNA_7264 0.24 -0.5
1,255,637 + 15632 mRNA_7264 0.27 1.0
1,255,669 - 15632 mRNA_7264 0.28 -0.3
1,255,769 + 15632 mRNA_7264 0.30 0.7
1,255,803 + 15632 mRNA_7264 0.31 -0.3
1,255,814 - 15632 mRNA_7264 0.31 -0.2
1,255,884 + 15632 mRNA_7264 0.33 -1.5
1,255,894 + 15632 mRNA_7264 0.33 -0.0
1,255,944 + 15632 mRNA_7264 0.35 -0.3
1,256,232 - 15632 mRNA_7264 0.42 0.6
1,256,876 - 15632 mRNA_7264 0.58 0.8
1,256,979 + 15632 mRNA_7264 0.60 0.2
1,257,067 - 15632 mRNA_7264 0.63 0.6
1,257,123 + 15632 mRNA_7264 0.64 -0.3
1,257,412 - 15632 mRNA_7264 0.71 1.1
1,257,436 - 15632 mRNA_7264 0.72 -0.1
1,257,547 - 15632 mRNA_7264 0.75 0.1
1,257,558 + 15632 mRNA_7264 0.75 4.1
1,257,560 - 15632 mRNA_7264 0.75 0.1
1,257,583 + 15632 mRNA_7264 0.75 -0.2
1,257,585 + 15632 mRNA_7264 0.76 0.0
1,257,740 - 15632 mRNA_7264 0.79 0.7
1,257,880 - 15632 mRNA_7264 0.83 0.3
1,258,180 + 0.9
1,258,199 - -1.1
1,258,333 - -1.2
1,258,333 - -0.8
1,258,466 + -0.7
1,258,600 - -0.5
1,258,617 + 0.3
1,258,629 + 0.5
1,258,921 - -1.7
1,259,489 - -0.2
1,259,490 - -0.4
1,259,492 - 0.3
1,259,506 + 0.1
1,259,523 - 1.2