Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7251

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1218970 to 1220341 15618 mRNA_7251: 15619 - Hypothetical Protein, at 1220664 to 1222024 15619 mRNA_7252: 15620 - Hypothetical Protein, at 1222281 to 1223804 15620

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,219,737 - 15618 mRNA_7250 0.56 1.1
1,219,941 + 15618 mRNA_7250 0.71 -0.6
1,220,072 - 15618 mRNA_7250 0.80 -0.0
1,220,149 + 15618 mRNA_7250 0.86 0.6
1,220,160 - 15618 mRNA_7250 0.87 0.8
1,220,193 - 15618 mRNA_7250 0.89 0.6
1,220,193 - 15618 mRNA_7250 0.89 0.6
1,220,194 + 15618 mRNA_7250 0.89 -3.2
1,220,199 + 15618 mRNA_7250 0.90 -0.5
1,220,199 + 15618 mRNA_7250 0.90 0.8
1,220,205 + -0.1
1,220,331 + -1.2
1,220,360 + 2.2
1,220,374 + 1.1
1,220,377 - -0.7
1,220,626 - 0.8
1,220,673 - -1.9
1,220,816 + 15619 mRNA_7251 0.11 -1.8
1,220,938 + 15619 mRNA_7251 0.20 -0.5
1,220,950 + 15619 mRNA_7251 0.21 -0.9
1,220,956 - 15619 mRNA_7251 0.21 -0.0
1,220,956 - 15619 mRNA_7251 0.21 1.5
1,221,264 + 15619 mRNA_7251 0.44 0.0
1,221,338 - 15619 mRNA_7251 0.50 -0.5
1,221,400 + 15619 mRNA_7251 0.54 -0.2
1,221,463 + 15619 mRNA_7251 0.59 0.3
1,221,581 - 15619 mRNA_7251 0.67 0.3
1,221,791 + 15619 mRNA_7251 0.83 -0.3
1,221,939 - -0.1
1,222,028 + 0.3
1,222,134 - 0.1
1,222,137 + 0.7
1,222,189 + -0.9
1,222,207 + -0.2
1,222,649 - 15620 mRNA_7252 0.24 -1.5
1,222,691 - 15620 mRNA_7252 0.27 -0.6
1,222,812 + 15620 mRNA_7252 0.35 0.3
1,222,850 - 15620 mRNA_7252 0.37 -0.9
1,222,945 + 15620 mRNA_7252 0.44 0.5
1,222,949 - 15620 mRNA_7252 0.44 2.7