Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7227

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1175509 to 1176564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1176800 to 1178543 15595 mRNA_7228: 15596 - KOG1674 Cyclin, at 1179153 to 1180280 15596

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,176,034 + 15594 mRNA_7226 0.50 -0.3
1,176,776 + 0.4
1,176,780 - -1.8
1,176,938 + 0.3
1,177,087 - 15595 mRNA_7227 0.16 -2.1
1,177,174 + 15595 mRNA_7227 0.21 0.3
1,177,230 - 15595 mRNA_7227 0.25 -1.7
1,177,374 - 15595 mRNA_7227 0.33 -0.8
1,178,102 - 15595 mRNA_7227 0.75 1.1
1,178,106 - 15595 mRNA_7227 0.75 0.2
1,178,109 - 15595 mRNA_7227 0.75 -1.8
1,178,375 + 0.6
1,178,387 + -0.4
1,178,389 + -1.5
1,178,398 - -1.9
1,178,439 + -2.3
1,178,548 + -0.0
1,178,557 + -1.0
1,178,573 + 0.3
1,178,580 - -0.4
1,178,590 + 0.2
1,178,590 - 0.2
1,178,591 + -1.9
1,178,591 + -1.4
1,178,592 - -1.3
1,178,594 + -1.3
1,178,598 + -1.9
1,178,636 - -0.0
1,178,648 - -0.9
1,178,648 - 0.6
1,178,651 - -0.1
1,178,658 + 1.5
1,178,662 - 0.3
1,178,663 + -1.4
1,178,666 - 0.3
1,178,667 - 0.2
1,178,668 + 1.1
1,178,671 + -0.5
1,178,678 + -0.2
1,178,681 + -0.5
1,178,682 - 0.7
1,178,690 - 1.6
1,178,690 - -0.7
1,178,692 + -1.2
1,178,694 + -1.2
1,178,714 + -0.6
1,178,733 - -1.1
1,178,749 - -2.0
1,178,800 - -0.6
1,178,832 - 0.1
1,178,843 + 0.1
1,178,854 - -0.8
1,178,875 + -0.3
1,178,894 - 2.0
1,178,895 + -1.2
1,178,895 + 1.3
1,178,954 - 0.6
1,178,968 - -0.8
1,178,969 - -0.8
1,178,978 - 0.1
1,178,978 - -1.0
1,178,981 + 0.3
1,178,983 - -0.7
1,178,988 - -0.9
1,178,988 + 0.1
1,178,995 - 0.9
1,179,006 + -0.4
1,179,114 - 2.5
1,179,120 + 0.6
1,179,143 + -0.3
1,179,145 + -1.3
1,179,152 - 0.5
1,179,157 + -0.5