Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7215

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7214: 15582 - K17792 TIM54 mitochondrial import inner membrane translocase subunit TIM54, at 1147012 to 1148920 15582 mRNA_7215: 15583 - K10253 K10253 DOPA 4,5-dioxygenase, at 1149235 to 1150219 15583 mRNA_7216: 15584 - K01535 PMA1, PMA2 H+-transporting ATPase, at 1150429 to 1154847 15584

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,148,983 - -0.6
1,149,013 + -0.7
1,149,035 + 0.1
1,149,164 - -1.3
1,149,428 - 15583 mRNA_7215 0.20 -1.4
1,149,436 - 15583 mRNA_7215 0.20 0.4
1,149,461 - 15583 mRNA_7215 0.23 0.5
1,149,480 + 15583 mRNA_7215 0.25 1.9
1,149,592 + 15583 mRNA_7215 0.36 0.4
1,149,743 + 15583 mRNA_7215 0.52 -1.4
1,149,876 + 15583 mRNA_7215 0.65 -0.8
1,150,609 - -0.5
1,150,640 + 1.0
1,150,902 + 15584 mRNA_7216 0.11 -0.6