Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7198

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7198: 15566 - Hypothetical Protein, at 1107641 to 1108204 15566 mRNA_7199: 15567 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 1108363 to 1109217 15567

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,107,355 - -1.5
1,107,374 - -1.5
1,107,848 - 15566 mRNA_7198 0.37 0.9
1,108,095 - 15566 mRNA_7198 0.80 -0.2
1,108,128 + 15566 mRNA_7198 0.86 -0.1
1,108,140 + 15566 mRNA_7198 0.88 -0.4
1,108,252 - 1.5
1,108,259 - 0.6
1,108,260 - 0.5
1,108,270 - 0.8
1,108,274 - 0.5
1,108,274 - -0.3
1,108,277 + -1.2
1,108,295 + 0.8
1,108,743 + 15567 mRNA_7199 0.44 -1.1
1,108,861 + 15567 mRNA_7199 0.58 -0.7
1,109,003 + 15567 mRNA_7199 0.75 -0.6
1,109,008 - 15567 mRNA_7199 0.75 0.6