Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7180

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7179: 15547 - Hypothetical Protein, at 1060340 to 1061881 15547 mRNA_7180: 15548 - Hypothetical Protein, at 1062711 to 1064267 15548 mRNA_7181: 15549 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1064763 to 1065253 15549

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,062,102 - 0.4
1,062,208 + 0.1
1,062,270 + 0.8
1,062,368 - 0.3
1,062,444 + -2.5
1,062,708 - 0.5
1,062,829 - -0.9
1,062,847 + 0.0
1,063,022 + 15548 mRNA_7180 0.20 0.9
1,063,435 - 15548 mRNA_7180 0.46 -0.4
1,063,680 + 15548 mRNA_7180 0.62 1.6
1,063,687 - 15548 mRNA_7180 0.63 -0.3
1,063,835 + 15548 mRNA_7180 0.72 1.6
1,064,045 + 15548 mRNA_7180 0.86 0.8
1,064,285 - 0.3
1,064,546 - 0.3
1,064,603 - -0.3
1,064,675 - -1.0
1,064,767 - -1.7
1,064,769 + 0.2
1,064,774 + -0.0
1,064,783 + 0.5
1,064,820 - 15549 mRNA_7181 0.12 0.6
1,064,838 + 15549 mRNA_7181 0.15 1.3
1,064,945 + 15549 mRNA_7181 0.37 -0.2
1,064,945 - 15549 mRNA_7181 0.37 -0.0
1,064,950 + 15549 mRNA_7181 0.38 0.3
1,065,034 - 15549 mRNA_7181 0.55 0.4
1,065,189 - 15549 mRNA_7181 0.87 0.2