Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7148

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7147: 15515 - Hypothetical Protein, at 994364 to 995021 15515 mRNA_7148: 15516 - KOG2246 Galactosyltransferases, at 995963 to 997965 15516 mRNA_7149: 15517 - K12733 PPIL1 peptidyl-prolyl cis-trans isomerase-like 1, at 998100 to 998920 15517

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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994,974 + 0.0
995,077 - -0.2
995,358 - -1.9
995,368 + 0.9
995,382 - -0.2
995,392 + -0.2
995,560 - -0.3
995,570 - -0.5
995,574 - 2.0
995,582 - 1.5
995,583 + -0.6
995,595 + -0.0
995,598 + 0.8
995,776 - -0.0
995,902 + 0.8
996,037 + 0.2
996,059 - 1.4
996,173 + 15516 mRNA_7148 0.10 0.8
996,434 + 15516 mRNA_7148 0.24 0.8
996,608 + 15516 mRNA_7148 0.32 0.1
996,609 + 15516 mRNA_7148 0.32 -1.0
996,638 - 15516 mRNA_7148 0.34 -0.1
996,967 - 15516 mRNA_7148 0.50 0.9
997,077 + 15516 mRNA_7148 0.56 0.2
997,920 + -0.4
998,061 + -0.3
998,061 + -2.3
998,062 - -0.6
998,242 + 15517 mRNA_7149 0.17 -1.0
998,309 - 15517 mRNA_7149 0.25 -0.7
998,664 + 15517 mRNA_7149 0.69 0.1
998,681 + 15517 mRNA_7149 0.71 1.1
998,770 + 15517 mRNA_7149 0.82 1.1
998,795 + 15517 mRNA_7149 0.85 0.7
998,801 - 15517 mRNA_7149 0.85 0.2
998,812 - 15517 mRNA_7149 0.87 1.9
998,941 + 0.0
998,956 + -0.8