Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7141

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971914 to 976417 15508 mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976528 to 979510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979628 to 983826 15510

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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975,755 + 15508 mRNA_7140 0.85 -0.9
976,065 - -0.4
976,209 - -1.0
976,314 - -0.4
976,380 + 0.0
976,501 - -0.5
976,519 + -0.9
976,519 + 0.2
976,635 - -1.7
976,636 - 0.6
976,824 + -2.0
976,933 - 15509 mRNA_7141 0.14 0.7
976,944 - 15509 mRNA_7141 0.14 -1.6
976,952 + 15509 mRNA_7141 0.14 0.1
976,953 + 15509 mRNA_7141 0.14 0.8
976,967 - 15509 mRNA_7141 0.15 1.1
977,587 - 15509 mRNA_7141 0.36 0.7
977,815 + 15509 mRNA_7141 0.43 0.1
978,228 - 15509 mRNA_7141 0.57 1.4
978,545 + 15509 mRNA_7141 0.68 0.6
978,714 - 15509 mRNA_7141 0.73 -1.4
978,844 + 15509 mRNA_7141 0.78 0.1
979,150 + 15509 mRNA_7141 0.88 -1.2
979,194 - 15509 mRNA_7141 0.89 -1.0
979,556 - 0.6
979,793 + 0.3
979,983 - -0.2
980,035 + -0.6
980,101 + 15510 mRNA_7142 0.11 -1.6
980,103 - 15510 mRNA_7142 0.11 -1.7
980,283 - 15510 mRNA_7142 0.16 -2.3