Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7101

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7100: 15468 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 880881 to 881621 15468 mRNA_7101: 15469 - K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase, at 881719 to 882426 15469 mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882881 to 885755 15470

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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880,836 - -1.7
880,847 + -0.2
880,996 + 15468 mRNA_7100 0.16 0.4
881,007 - 15468 mRNA_7100 0.17 -0.3
881,149 - 15468 mRNA_7100 0.36 0.9
881,365 + 15468 mRNA_7100 0.65 -1.9
881,383 + 15468 mRNA_7100 0.68 1.3
881,594 - -0.6
881,597 + 0.1
881,731 + 1.4
881,870 - 15469 mRNA_7101 0.21 0.2
881,876 - 15469 mRNA_7101 0.22 0.9
881,882 - 15469 mRNA_7101 0.23 -0.9
881,896 + 15469 mRNA_7101 0.25 1.1
882,017 + 15469 mRNA_7101 0.42 -1.8
882,027 - 15469 mRNA_7101 0.44 -0.2
882,053 - 15469 mRNA_7101 0.47 1.5
882,114 - 15469 mRNA_7101 0.56 0.3
882,177 - 15469 mRNA_7101 0.65 0.8
882,187 - 15469 mRNA_7101 0.66 0.3
882,189 + 15469 mRNA_7101 0.66 0.8
882,191 + 15469 mRNA_7101 0.67 -0.6
882,192 - 15469 mRNA_7101 0.67 0.3
882,192 - 15469 mRNA_7101 0.67 3.3
882,209 + 15469 mRNA_7101 0.69 1.0
882,213 - 15469 mRNA_7101 0.70 -5.4
882,219 + 15469 mRNA_7101 0.71 0.4
882,236 + 15469 mRNA_7101 0.73 -0.7
882,380 - 2.6
882,464 - -1.1
882,465 + -0.2
882,472 - 1.1
882,475 - 2.4
882,477 - -2.6
882,485 - -1.7
882,486 - 1.0
882,585 + -0.5
882,648 - -0.8
882,655 - 0.8
882,787 - 1.5
882,790 - -0.5
883,060 - 0.1