Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7084

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7083: 15451 - K18803 HPM1 protein-histidine N-methyltransferase, at 840577 to 841991 15451 mRNA_7084: 15452 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 842141 to 843806 15452 mRNA_7085: 15453 - HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689, at 843971 to 847409 15453

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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841,411 + 15451 mRNA_7083 0.59 1.2
841,713 - 15451 mRNA_7083 0.80 2.4
841,733 + 15451 mRNA_7083 0.82 0.4
842,012 - -1.2
842,022 - -1.7
842,027 + -0.4
842,029 + 0.3
842,180 - 1.2
842,189 + 0.8
842,280 - -0.2
842,406 - 15452 mRNA_7084 0.16 -1.8
842,440 - 15452 mRNA_7084 0.18 0.1
842,764 + 15452 mRNA_7084 0.37 0.9
843,075 + 15452 mRNA_7084 0.56 0.5
843,154 + 15452 mRNA_7084 0.61 0.7
843,185 - 15452 mRNA_7084 0.63 -0.9
843,294 + 15452 mRNA_7084 0.69 0.7
843,576 + 15452 mRNA_7084 0.86 -1.2
843,576 + 15452 mRNA_7084 0.86 0.2
843,584 - 15452 mRNA_7084 0.87 -1.2
843,749 + -0.6