Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7065

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795921 to 797535 15432 mRNA_7065: 15433 - K03469 rnhA, RNASEH1 ribonuclease HI, at 797694 to 798933 15433 mRNA_7066: 15434 - K00799 GST, gst glutathione S-transferase, at 799211 to 800128 15434

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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796,718 + 15432 mRNA_7064 0.49 0.6
796,887 + 15432 mRNA_7064 0.60 2.4
797,161 + 15432 mRNA_7064 0.77 1.4
797,274 + 15432 mRNA_7064 0.84 -0.6
797,311 + 15432 mRNA_7064 0.86 0.5
797,425 - 0.7
797,597 + 1.1
797,603 + -0.0
797,608 + -1.7
797,616 - 0.1
797,621 - -0.2
797,745 + -1.7
797,892 + 15433 mRNA_7065 0.16 -0.1
797,898 + 15433 mRNA_7065 0.16 0.9
798,068 - 15433 mRNA_7065 0.30 -0.1
798,220 - 15433 mRNA_7065 0.42 0.1
798,325 - 15433 mRNA_7065 0.51 -0.2
798,470 + 15433 mRNA_7065 0.63 1.1
798,855 + -0.9
799,632 - 15434 mRNA_7066 0.46 1.1
799,794 + 15434 mRNA_7066 0.64 1.3
799,891 - 15434 mRNA_7066 0.74 -0.7