Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7062

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789472 to 792234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792528 to 793710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793722 to 794198 15431

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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791,699 - 15429 mRNA_7061 0.81 -0.5
791,728 - 15429 mRNA_7061 0.82 0.9
791,906 - 15429 mRNA_7061 0.88 0.4
792,025 + 1.0
792,155 - 1.1
792,179 + -0.5
792,331 + -0.6
792,333 - -0.5
792,340 - -0.5
792,344 - -0.9
792,349 + 0.3
792,507 + -0.1
792,630 - 0.2
792,634 + 0.4
792,941 - 15430 mRNA_7062 0.35 -0.5
792,957 + 15430 mRNA_7062 0.36 2.1
793,128 + 15430 mRNA_7062 0.51 -0.1
793,221 - 15430 mRNA_7062 0.59 -1.0
793,683 + 0.8
793,693 + 1.5
793,714 - 0.9
793,873 + 15431 mRNA_7063 0.32 -1.2
793,966 + 15431 mRNA_7063 0.51 1.5
794,433 - 0.1
794,435 + 1.0
794,582 + -0.0