Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7059

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779457 to 784844 15426 mRNA_7059: 15427 - BLAST golgi apparatus membrane protein [Pochonia chlamy..., at 785063 to 786823 15427 mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786976 to 788620 15428

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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784,083 - 15426 mRNA_7058 0.86 -0.5
784,251 + 15426 mRNA_7058 0.89 0.1
784,452 - -0.2
784,703 + -0.4
784,789 - -2.5
784,798 - -0.0
784,822 - 0.3
785,100 - 0.1
785,275 + 15427 mRNA_7059 0.12 -0.9
785,377 - 15427 mRNA_7059 0.18 -0.1
785,527 - 15427 mRNA_7059 0.26 0.8
785,859 + 15427 mRNA_7059 0.45 -0.1
786,000 - 15427 mRNA_7059 0.53 0.8
786,000 - 15427 mRNA_7059 0.53 -0.7
786,124 - 15427 mRNA_7059 0.60 -0.0
786,285 - 15427 mRNA_7059 0.69 -3.3
786,457 + 15427 mRNA_7059 0.79 0.6
786,461 + 15427 mRNA_7059 0.79 0.5
786,566 - 15427 mRNA_7059 0.85 1.2
786,576 - 15427 mRNA_7059 0.86 0.6
786,604 + 15427 mRNA_7059 0.88 -1.0
786,741 + -0.1
786,769 + -0.1
786,789 + 1.6
786,871 - -1.0
787,183 + 15428 mRNA_7060 0.13 -0.3