Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7055

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938 15422 mRNA_7055: 15423 - K03841 FBP, fbp fructose-1,6-bisphosphatase I, at 774217 to 775850 15423 mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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773,982 + 0.4
774,003 + -0.8
774,025 + 0.4
774,152 + 0.4
774,467 - 15423 mRNA_7055 0.15 -1.3
774,871 - 15423 mRNA_7055 0.40 -1.8
774,987 - 15423 mRNA_7055 0.47 -3.9
775,204 + 15423 mRNA_7055 0.60 0.1
775,288 - 15423 mRNA_7055 0.66 -1.6
775,416 - 15423 mRNA_7055 0.73 -1.8
775,446 + 15423 mRNA_7055 0.75 -5.0
775,575 - 15423 mRNA_7055 0.83 -5.6
775,636 + 15423 mRNA_7055 0.87 0.3
775,704 + -4.2
775,708 - -3.2
775,726 + -4.2
775,734 - -5.6
775,738 - -3.4
775,739 + -2.1
775,739 - -0.7
775,740 + -2.7
775,746 + -3.2
775,749 + -4.1
775,846 - -4.4
775,861 + -5.0
775,903 - -2.0
776,013 - 0.5
776,026 - 1.9
776,028 - 0.1
776,032 + -1.3
776,034 - -0.3
776,043 - 0.5
776,043 + -0.2
776,047 - -0.2
776,050 - 1.6
776,051 - -0.0
776,053 - -0.3
776,057 + -1.8
776,058 + -0.3
776,062 - -0.6
776,064 - 0.5
776,077 + 1.4
776,124 - -0.6
776,125 - 0.9
776,132 - -0.6
776,132 - 1.1
776,147 + -1.4
776,149 - 0.3
776,168 + -0.7
776,179 - -0.5
776,208 + 0.7
776,298 - 0.1
776,305 + 0.0
776,307 + -0.6
776,324 - -0.0
776,442 + -1.1
776,445 - 0.5
776,763 + 15424 mRNA_7056 0.34 0.7