Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7048

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7047: 15415 - K07466 RFA1, RPA1, rpa replication factor A1, at 752253 to 754600 15415 mRNA_7048: 15416 - KOG2476 Uncharacterized conserved protein, at 754979 to 757509 15416

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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754,787 + 0.2
754,789 + 0.6
754,805 - 0.2
754,815 + -0.1
754,822 + 1.4
754,922 - -1.2
754,930 - 3.7
754,932 + -0.1
754,933 - -1.3
754,937 + 0.2
754,937 + 0.5
754,945 - 0.1
754,947 + 2.0
754,948 + 0.7
754,949 + -1.2
754,952 - 1.2
754,962 + 1.2
754,979 + 0.7
754,988 + -1.1
755,088 + 1.5
755,092 + 0.1
755,097 + 0.4
755,275 - 15416 mRNA_7048 0.12 0.7
755,400 + 15416 mRNA_7048 0.17 0.4
755,408 + 15416 mRNA_7048 0.17 -1.2
755,634 - 15416 mRNA_7048 0.26 0.8
755,874 - 15416 mRNA_7048 0.35 0.5
755,883 + 15416 mRNA_7048 0.36 0.2
755,967 - 15416 mRNA_7048 0.39 1.9
756,011 + 15416 mRNA_7048 0.41 0.1
756,289 + 15416 mRNA_7048 0.52 1.4
756,566 - 15416 mRNA_7048 0.63 0.7
756,833 - 15416 mRNA_7048 0.73 2.1
756,835 - 15416 mRNA_7048 0.73 0.6
758,415 - 1.2
758,439 - -0.2