Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7021

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7021: 15389 - K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase, at 692794 to 694459 15389 mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694742 to 696268 15390

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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691,794 + 1.2
691,796 - -0.8
691,796 - -2.7
691,939 + -1.5
691,940 - 0.4
692,072 - 1.4
692,081 + 0.8
692,084 - -1.1
692,232 - 2.5
692,248 + -0.2
692,393 - -0.5
692,395 + 0.2
692,395 + 0.2
692,527 + 0.1
692,528 + 1.8
692,553 - -0.0
692,661 + 0.5
692,678 - 0.9
692,680 + -0.3
692,683 + -2.1
692,827 - 0.6
692,845 - -1.0
692,856 - -1.6
692,991 - 15389 mRNA_7021 0.12 -1.6
693,111 + 15389 mRNA_7021 0.19 -1.0
693,117 - 15389 mRNA_7021 0.19 -0.5
693,137 + 15389 mRNA_7021 0.21 -1.8
693,137 + 15389 mRNA_7021 0.21 -1.9
693,146 + 15389 mRNA_7021 0.21 -2.4
693,164 + 15389 mRNA_7021 0.22 -1.2
693,404 - 15389 mRNA_7021 0.37 -0.9
693,709 + 15389 mRNA_7021 0.55 -0.0
693,709 - 15389 mRNA_7021 0.55 -1.1
694,769 + 0.4
694,890 - -0.6
695,063 - 15390 mRNA_7022 0.21 -0.4
695,163 + 15390 mRNA_7022 0.28 -0.4
695,180 - 15390 mRNA_7022 0.29 -0.2
695,194 + 15390 mRNA_7022 0.30 0.9
695,323 + 15390 mRNA_7022 0.38 -0.5