Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7016

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384 mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683640 to 684233 15385

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
679,572 - 15383 mRNA_7015 0.62 -0.2
679,869 - 15383 mRNA_7015 0.76 0.2
680,157 - 15383 mRNA_7015 0.89 0.1
680,585 + -0.1
680,694 - -0.0
680,711 + 0.1
680,745 + 0.1
680,749 + 0.5
681,158 - 15384 mRNA_7016 0.20 -0.9
681,343 - 15384 mRNA_7016 0.27 1.2
681,442 + 15384 mRNA_7016 0.30 0.5
681,639 + 15384 mRNA_7016 0.37 0.0
681,720 - 15384 mRNA_7016 0.39 -0.8
681,752 + 15384 mRNA_7016 0.40 0.1
682,025 + 15384 mRNA_7016 0.50 1.0
682,027 - 15384 mRNA_7016 0.50 0.5
682,031 + 15384 mRNA_7016 0.50 0.3
682,167 - 15384 mRNA_7016 0.54 0.5
682,170 + 15384 mRNA_7016 0.54 1.1
682,179 + 15384 mRNA_7016 0.55 0.0
682,186 + 15384 mRNA_7016 0.55 0.6
682,199 + 15384 mRNA_7016 0.55 -0.9
682,500 - 15384 mRNA_7016 0.65 -0.1
682,564 - 15384 mRNA_7016 0.68 -0.3
682,633 - 15384 mRNA_7016 0.70 0.5
682,648 + 15384 mRNA_7016 0.70 1.8
682,948 + 15384 mRNA_7016 0.81 -0.0
682,978 - 15384 mRNA_7016 0.82 1.5
683,002 + 15384 mRNA_7016 0.82 1.1
683,114 + 15384 mRNA_7016 0.86 0.1
683,202 + 15384 mRNA_7016 0.89 -1.0
683,241 - -2.1
683,245 + 0.3
683,412 + 2.3
683,549 + 0.4
683,985 - 15385 mRNA_7017 0.58 -0.3
683,996 - 15385 mRNA_7017 0.60 -2.2
684,100 + 15385 mRNA_7017 0.77 -0.1
684,141 - 15385 mRNA_7017 0.84 -0.7
684,293 + 0.0