Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7015

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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677,376 + -0.0
677,668 - 0.2
677,939 - 0.5
678,090 + 0.5
678,091 + -0.9
678,262 + -0.9
678,277 - -0.7
678,384 - 0.3
678,403 + -0.8
678,405 - 0.5
678,529 - 15383 mRNA_7015 0.15 -0.5
678,691 - 15383 mRNA_7015 0.22 -0.4
678,985 - 15383 mRNA_7015 0.35 1.6
679,036 + 15383 mRNA_7015 0.38 -1.6
679,572 - 15383 mRNA_7015 0.62 -0.2
679,869 - 15383 mRNA_7015 0.76 0.2
680,157 - 15383 mRNA_7015 0.89 0.1
680,585 + -0.1
680,694 - -0.0
680,711 + 0.1
680,745 + 0.1
680,749 + 0.5
681,158 - 15384 mRNA_7016 0.20 -0.9
681,343 - 15384 mRNA_7016 0.27 1.2