Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7009

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7008: 15376 - Hypothetical Protein, at 661061 to 661645 15376 mRNA_7009: 15377 - Hypothetical Protein, at 661814 to 663427 15377 mRNA_7010: 15378 - Hypothetical Protein, at 663898 to 666099 15378

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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660,814 + -0.2
660,824 - -0.1
660,829 + -0.3
660,835 + -0.1
660,842 - -0.4
660,843 + 0.4
660,847 + 1.0
660,851 + -0.1
660,910 + 0.5
660,919 - 0.5
660,923 - -0.8
660,936 + 0.4
660,949 + -0.1
660,960 + 1.2
660,982 + -0.1
661,131 - 15376 mRNA_7008 0.12 -0.1
661,280 + 15376 mRNA_7008 0.37 0.5
661,283 + 15376 mRNA_7008 0.38 0.7
661,285 - 15376 mRNA_7008 0.38 0.4
661,304 - 15376 mRNA_7008 0.42 -0.2
661,381 - 15376 mRNA_7008 0.55 -0.5
661,500 + 15376 mRNA_7008 0.75 -1.5
661,622 + 1.8
661,647 + -0.6
661,716 + 0.2
661,739 - -0.0
661,763 + 1.4
661,769 + -1.2
661,773 - -0.8
661,776 + 0.3
661,784 + 0.7
661,789 + -1.5
661,797 - -0.2
661,846 - 0.4
661,853 - -0.8
661,893 - -0.6
661,914 - -0.7
661,927 - -0.5
661,940 - -1.2
662,181 + 15377 mRNA_7009 0.23 0.3
662,210 - 15377 mRNA_7009 0.25 0.3
662,212 - 15377 mRNA_7009 0.25 -0.7
662,339 - 15377 mRNA_7009 0.33 -3.1
662,349 - 15377 mRNA_7009 0.33 0.1
662,647 + 15377 mRNA_7009 0.52 1.2
662,655 + 15377 mRNA_7009 0.52 1.4
663,079 - 15377 mRNA_7009 0.78 -0.8
663,085 - 15377 mRNA_7009 0.79 -0.1
663,245 + 15377 mRNA_7009 0.89 -0.7
663,376 + 1.0
663,384 - 1.6
663,532 - 1.9
663,532 + 0.3
663,562 + 1.8
663,583 + -0.4
663,681 - -1.5
663,830 + 1.0
663,850 + 1.0
663,856 + 1.7
663,859 + 0.1
663,868 - 2.6
663,877 + -1.2
663,880 + 1.3
663,896 + -0.8