Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7003

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7003: 15371 - KOG2394 WD40 protein DMR-N9, at 647498 to 649944 15371 mRNA_7004: 15372 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445, at 650077 to 652863 15372

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
646,553 + -0.9
647,546 - -1.5
647,688 - 0.6
647,703 - 1.1
647,729 - 0.2
647,741 + 1.0
648,416 - 15371 mRNA_7003 0.38 -0.2
648,714 + 15371 mRNA_7003 0.50 0.1
648,855 - 15371 mRNA_7003 0.55 0.8
649,748 - 0.1
649,752 + -0.9
649,865 - -0.1
649,892 + 0.0
649,905 + -1.8
650,016 + -0.1
650,048 + -0.5
650,156 - -0.8
650,173 + 0.4
650,177 + -2.0
650,335 - -1.4
650,348 + -0.4
650,357 - 15372 mRNA_7004 0.10 -0.9
650,365 - 15372 mRNA_7004 0.10 -0.6
650,492 - 15372 mRNA_7004 0.15 -2.8
650,494 + 15372 mRNA_7004 0.15 0.4
650,624 - 15372 mRNA_7004 0.20 1.7