Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6997

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365 mRNA_6998: 15366 - K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase, at 632241 to 635924 15366

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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629,412 - 15364 mRNA_6996 0.64 0.4
629,710 - 15364 mRNA_6996 0.78 2.3
629,855 - 15364 mRNA_6996 0.85 0.2
629,872 - 15364 mRNA_6996 0.85 -0.9
629,885 - 15364 mRNA_6996 0.86 0.4
630,289 + -1.5
630,581 - 15365 mRNA_6997 0.19 1.5
630,641 + 15365 mRNA_6997 0.22 -0.2
630,709 - 15365 mRNA_6997 0.26 -0.1
631,029 + 15365 mRNA_6997 0.44 0.7
631,313 - 15365 mRNA_6997 0.61 1.0
631,347 - 15365 mRNA_6997 0.62 -0.9
631,478 - 15365 mRNA_6997 0.70 -0.4
631,606 + 15365 mRNA_6997 0.77 -0.6
631,628 + 15365 mRNA_6997 0.79 1.5
631,762 - 15365 mRNA_6997 0.86 1.0
631,897 + -0.8
632,045 + 0.9
632,046 - -0.4
632,046 - 0.1
632,057 + 0.3
632,058 + -0.8
632,060 + 0.3
632,073 - -0.4
632,076 + 1.0
632,215 + 0.2
632,218 - 0.4
632,230 - 1.4
632,238 + 1.3
632,365 + 1.8
632,372 + -0.4
632,378 + 1.1
632,381 - 1.5
632,389 + 0.2