Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6975

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574442 to 577802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578459 to 580488 15343

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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577,638 + -0.9
577,663 - 1.5
577,670 + 0.5
577,803 + 0.2
577,804 - 0.3
577,814 + 1.9
577,933 + 1.7
577,950 - -0.4
577,958 + -0.6
577,962 + 0.2
577,964 + 0.5
577,967 + 0.6
577,977 + 2.1
577,981 - -0.3
577,981 + -1.6
578,087 - 1.5
578,110 + 0.3
578,327 + 1.0
578,418 - 0.1
578,715 + 15343 mRNA_6975 0.13 0.9
579,001 + 15343 mRNA_6975 0.27 -0.3
579,150 - 15343 mRNA_6975 0.34 0.3
579,285 + 15343 mRNA_6975 0.41 0.3
579,565 - 15343 mRNA_6975 0.54 0.4
579,586 - 15343 mRNA_6975 0.56 1.8
579,587 - 15343 mRNA_6975 0.56 0.3
579,737 - 15343 mRNA_6975 0.63 0.5
580,034 - 15343 mRNA_6975 0.78 -0.2
580,045 - 15343 mRNA_6975 0.78 0.1
580,184 + 15343 mRNA_6975 0.85 0.0
580,331 - -0.0
580,333 + -0.4
580,342 + 0.2
580,350 + 0.1
580,350 + -0.5
580,364 - 0.1
580,378 + 0.5
580,490 - 0.7
580,497 + 0.3
580,539 + 0.7
580,641 - -0.0
580,644 + -0.0
580,645 - 0.0
580,647 + -0.2
580,651 + 0.6
580,653 + 0.6
580,664 + -1.0
580,677 - 1.1
580,789 - 0.4
580,790 + 0.8
580,798 - 1.5
580,799 + -1.0
580,799 - -0.6
580,801 + 1.9
580,804 - -0.5
580,808 + -1.3
580,810 - 0.0
580,816 - 0.3
580,816 - -0.4
580,817 - 0.1
580,819 + 1.4
580,823 + 0.9
580,824 + 0.5
580,825 - -1.5
580,828 + 0.6
580,828 + 0.5
580,829 - 0.5
580,829 + -0.3
580,831 + 1.7
580,834 - 0.2
580,835 - 0.9
580,843 - -0.3
580,849 + -2.2
580,849 + 1.3
580,849 + 0.1
580,849 + 1.1
580,851 + 0.4
580,884 + 1.0
580,902 - 2.9
580,909 + 2.2
580,913 - 0.6
580,917 + -0.5
580,920 - 0.4
580,924 + 0.1
580,925 + -1.5
580,928 + 0.6
580,931 + -0.4
580,938 + -0.3
580,939 + 1.2
580,944 + -0.4
580,944 - 1.0
580,952 + 0.4
580,952 - -1.6
580,959 + 1.0
580,987 - -0.4
581,029 + 1.1
581,087 + -1.0
581,089 - -0.3
581,090 - -0.3
581,091 + -0.6
581,096 - 0.1
581,097 + -0.0
581,113 + 1.1
581,129 - -1.2
581,137 + 0.9
581,144 + 0.3
581,224 - 0.4
581,227 - -0.3
581,235 + -0.7
581,243 - -0.3
581,246 - 0.9
581,258 + -1.1
581,262 + 0.1
581,268 + -0.2
581,400 + -1.0
581,412 - -0.0
581,412 - 0.5
581,423 + 0.5
581,475 + 1.0
581,478 + -0.6
581,488 + -0.7