Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6948

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505314 to 506461 15316 mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506847 to 507636 15317

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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504,343 - -0.5
504,348 + 0.5
504,423 + 1.1
504,482 + 2.4
504,483 + 0.6
504,486 - 0.7
504,486 - -1.0
504,582 + -0.3
504,630 + -0.0
504,698 - -1.7
504,772 + -0.7
504,775 + -0.2
504,798 + 1.0
504,799 + -0.4
504,799 + 0.9
504,799 + -1.2
504,906 - -0.3
505,082 - 1.7
505,086 + 1.6
505,087 - 2.4
505,097 - -0.1
505,103 + -0.3
505,227 - 0.1
505,381 + 0.1
505,664 - 15316 mRNA_6948 0.30 1.4
505,678 + 15316 mRNA_6948 0.32 -0.5
505,687 - 15316 mRNA_6948 0.32 1.5
505,829 - 15316 mRNA_6948 0.45 1.1
506,113 + 15316 mRNA_6948 0.70 0.0
506,114 + 15316 mRNA_6948 0.70 0.4
506,400 + 0.8
506,408 + -0.1
506,415 - -0.3
506,426 + 0.3
506,539 + -0.2
506,539 - -0.5
506,549 - 0.7
506,560 - 0.6
506,568 - 0.5
506,570 + -0.6
506,575 + 0.4
506,575 + 1.6
506,582 - 0.2
506,588 + -0.0
506,652 - -0.6
506,655 + 0.3
506,672 - 0.4
506,679 + 0.7
506,695 + -0.3
506,713 - -0.7
506,849 + -0.3
506,970 + 15317 mRNA_6949 0.16 0.6
506,980 - 15317 mRNA_6949 0.17 1.8
506,987 - 15317 mRNA_6949 0.18 -0.6