Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6872

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6871: 15239 - K17600 VPS54 vacuolar protein sorting-associated protein 54, at 319945 to 325501 15239 mRNA_6872: 15240 - KOG3035 Isoamyl acetate-hydrolyzing esterase, at 325677 to 326693 15240 mRNA_6873: 15241 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 326924 to 328423 15241

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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324,705 + 15239 mRNA_6871 0.86 0.0
324,714 - 15239 mRNA_6871 0.86 0.4
324,714 + 15239 mRNA_6871 0.86 1.3
324,947 - 1.0
324,966 - -0.2
324,970 + 0.2
325,275 - 1.4
325,389 + 0.9
325,443 - 0.8
325,453 + -1.5
325,475 - 1.6
325,563 - 0.4
325,592 - 0.9
325,594 - -0.1
325,598 - 0.1
325,754 - 0.0
325,982 - 15240 mRNA_6872 0.30 0.7
326,032 - 15240 mRNA_6872 0.35 0.6
326,483 - 15240 mRNA_6872 0.79 1.1
326,610 + 0.3
326,765 + 0.4
327,035 - 0.8
327,186 + 15241 mRNA_6873 0.17 -1.9
327,204 - 15241 mRNA_6873 0.19 1.0
327,630 - 15241 mRNA_6873 0.47 -1.1
327,670 + 15241 mRNA_6873 0.50 0.9
327,673 - 15241 mRNA_6873 0.50 1.1